rs2866113 chr19:53809037 C>G
- Sequence
gtcaggagttcaagaccagcctgg[C/G]taacacagcgaaaccccatctcca
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) A549 (lung carcinoma) GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.03 | 0.26 | 1.20 | n/a | No Hit | |||
| RAD21_HUMAN | 1.22 | 0.09 | 1.21 | n/a | n/a |
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