rs28666987 chr2:232365689 C>T
- Sequence
acagccctgctctttcaccctgcc[C/T]gcctggtggcctccttagcctgca
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -3.23 | 2.33 | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | 0.30 | 1.16 | 1.30 | -4.41 | Discordant |
Items per page:
1 – 2 of 2
Motif analysis
