rs28719577 chr2:1235042 T>C

Sequence
tgagctggagccaagcggtgacca[T/C]gcgtgtccttcacacgccctcacg
ASB in cell types
HKC8 (kidney proximal tubule cell line)
ASB for transcription factors
E2F8_HUMAN EPAS1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
E2F8_HUMAN 2.74 n/a 6.8·10-31.00 1.00 n/a n/a
EPAS1_HUMAN 1.94 n/a 0.051.00 1.00 -3.13 Concordant
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Motif analysis

EPAS1_HUMAN Concordant
EPAS1_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Lung Muscle_Skeletal Testis

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