rs2877745 chr18:63016408 C>T
- Sequence
atgaagaaaattgagaagaaacga[C/T]gcgaaggttctcacagtttgtcat
- ASB in cell types
- CD34+ stem cells-derived erythroblasts erythroid progenitors THP-1 (acute monocytic leukemia) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.18 | 0.73 | 1.29 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, obesity with early age of onset (age >2), partial epilepsy, rheumatoid arthritis, systemic sclerosis, tetrology of fallot, waist hip ratio