rs287884 chr6:156802946 T>A
- Sequence
tataactacaaatatgaaaaacaa[T/A]taaagcgtgatccttatgctaatg
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN TBP_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.58 | 2.64 | 2.19 | 4.32 | Concordant | |||
| ANDR_HUMAN | -0.49 | 2.96 | 1.58 | n/a | No Hit | |||
| TBP_HUMAN | -0.97 | 1.91 | 1.50 | n/a | No Hit |
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Motif analysis
