rs2891168 chr9:22098620 A>G
- Sequence
aacaaaagatgtcctgtttggaac[A/G]ccaactctgtatcagttacttcag
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma) LNCaP C4-2 (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN HXB13_HUMAN A2NVP9_HUMAN BCOR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.57 | 0.10 | 1.74 | n/a | No Hit | |||
| HXB13_HUMAN | 3.05 | n/a | 1.25 | n/a | No Hit | |||
| A2NVP9_HUMAN | 1.89 | -1.40 | 1.50 | n/a | n/a | |||
| BCOR_HUMAN | 2.47 | -2.13 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
EMBL-EBI coronary artery disease, coronary artery disease (myocardial infarction, percutaneous transluminal coronary angioplasty, coronary artery bypass grafting, angina or chromic ischemic heart disease), medication use (beta blocking agents), myocardial infarction
GRASP ankle brachial index, aortic calcification, atrial fibrillation, coronary artery calcification (cac), coronary artery calcification (cac) (excluding previous myocardial infarction cases), coronary artery disease (cad), fasting blood glucose, glaucoma (primary open-angle glaucoma), glaucoma (primary open-angle glaucoma) (high pressure glaucoma), glaucoma (primary open-angle glaucoma) (normal pressure glaucoma), myocardial infarction (mi), prop taste detection threshold, sporadic intracranial aneurysms, total cholesterol