rs289817 chr15:63503476 G>A
- Sequence
ggctccttcgccgggttttacaag[G/A]agccccaacttggaagcaatattt
- ASB in cell types
- K562 (myelogenous leukemia) CD14+ monocytes fetal bone marrow-derived mononuclear cells 22RV1 (prostate carcinoma)
- ASB for transcription factors
- STAT1_HUMAN ANDR_HUMAN KMT2A_HUMAN ZF64B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.65 | n/a | 2.00 | 4.13 | Discordant | |||
| ANDR_HUMAN | 2.72 | -1.59 | 2.00 | n/a | No Hit | |||
| KMT2A_HUMAN | 2.74 | -0.31 | 1.25 | n/a | n/a | |||
| ZF64B_HUMAN | -1.14 | 1.49 | 1.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Esophagus_Mucosa, Heart_Left_Ventricle, Whole_Blood