rs2905088 chr9:133022500 C>A
- Sequence
cttcgccctttcttccaggttgtc[C/A]tgggcactgatggtcaccaggtgg
- ASB in cell types
- neutrophils from periferal blood GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes HeLa Kyoto (cervical adenocarcinoma)
- ASB for transcription factors
- STAT1_HUMAN FOXK2_HUMAN RAD21_HUMAN ERG_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -0.91 | 2.65 | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 0.54 | 2.82 | 1.33 | n/a | n/a | |||
| RAD21_HUMAN | 0.43 | 1.51 | 2.03 | n/a | n/a | |||
| ERG_HUMAN | -1.46 | 2.50 | 2.00 | n/a | No Hit |
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