rs2908423 chr7:5555535 A>G

Sequence
gaaattgaggcccgcagcgtgcgt[A/G]gcccggctggggccacggggttgg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN n/a 3.51 1.001.2·10-3 2.00 n/a No Hit
STAG1_HUMAN 2.07 -1.76 7.9·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

No data available

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