rs2916801 chr6:29942509 C>T
- Sequence
gtcgtcgcggtcgctgttctaaag[C/T]ccgcacgcacccaccgggactcag
- ASB in cell types
- WA09 (embryonic stem cells) A549 (lung carcinoma)
- ASB for transcription factors
- TP53B_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TP53B_HUMAN | 1.69 | -1.31 | 1.50 | n/a | n/a | |||
| CREB1_HUMAN | 1.55 | -0.20 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, hdl cholesterol, hdl cholesterol change with statins, ldl cholesterol