ADASTRA v5.1.3
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rs292553
chr7:135186596
T
>
C
Sequence
ggctggtgcctcttgcacgcacac[T/C]ggttgttctcactacagcatcact
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line)
0.28
1.04
0.99
3.7·10
-6
1.15
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
diastolic blood pressure (dbp)
,
fasting blood glucose
,
systolic blood pressure (sbp)
,
triglycerides
GTEx eQTL
Adipose_Subcutaneous
,
Adrenal_Gland
,
Esophagus_Mucosa
,
Liver
,
Lung
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Stomach
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale