rs294377 chr11:30605113 C>A

Sequence
tcaatactcttcaagtcaggtgtg[C/A]atctccccctgtccaccaggttaa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN NFAC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -1.68 1.85 1.000.02 1.25 n/a No Hit
NFAC3_HUMAN n/a 2.30 1.000.05 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin height homa-b homa-ir ldl cholesterol schizophrenia
GTEx eQTL Brain_Caudate_basal_ganglia

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