rs294542 chr15:94307009 T>A
- Sequence
gatctcgaaagtcgtacctcaata[T/A]gtgatggtgtgtcagagaggcagg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) germinal center B-cells GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN MEF2B_HUMAN E2F8_HUMAN BCL6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 1.19 | -1.22 | 1.00 | n/a | n/a | |||
| MEF2B_HUMAN | 1.93 | -0.36 | 1.50 | n/a | No Hit | |||
| E2F8_HUMAN | 2.63 | -2.67 | 1.00 | n/a | n/a | |||
| BCL6_HUMAN | 1.87 | -0.31 | 1.83 | n/a | No Hit | |||
| JUNB_HUMAN | 2.47 | n/a | 1.00 | n/a | No Hit |
Items per page:
1 – 5 of 5