rs295120 chr2:200377244 G>T

Sequence
cccaaatcccaaaactagtaagag[G/T]tagagctgggattcaatcttggtg
ASB in cell types
22RV1 (prostate carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 2.48 n/a 0.051.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease,  recurrent early onset major depressive disorder,  recurrent early onset major depressive disorder (females),  tetrology of fallot
GTEx eQTL Artery_Tibial,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis

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