rs2953621 chr7:133977650 C>G
- Sequence
tggtttgcgagcagctggtttttt[C/G]tttgctttgggttggtttgttttg
- ASB in cell types
- LNCaP (prostate carcinoma) PANC1 (pancreatic ductal adenocarcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA1_HUMAN FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.54 | 3.05 | 2.09 | 7.03 | Concordant | |||
| FOXA2_HUMAN | -1.10 | 2.59 | 3.00 | 6.11 | Concordant |
Items per page:
1 – 2 of 2
Motif analysis
