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rs29546 chr5:133423942 G>A

Sequence
cgcacgtgagctggagcccagcat[G/A]gagctgaggaacagcgctggggtc
ASB in cell types
A549 (lung carcinoma) hepatocytes esophagus muscularis mucosa

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma) 0.97 0.33 5.0·10-31.00 2.00
hepatocytes -0.72 1.25 1.007.1·10-3 1.00
esophagus muscularis mucosa -0.78 1.31 1.000.03 1.00
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Motif analysis

No data available

Genetic associations

No data available

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