rs295518 chr3:139570956 G>T
- Sequence
cccccagaggtggagccttcagag[G/T]caggcaggcctccttgagctgtgg
- ASB in cell types
- CFPAC-1(pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.96 | -1.87 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Adrenal_Gland, Heart_Left_Ventricle, Liver, Muscle_Skeletal, Nerve_Tibial