rs2965174 chr19:44741758 A>G
- Sequence
aggacactagcccactagtacctg[A/G]ttgtctactgtcacctcgctgaga
- ASB in cell types
- keratinocytes
- ASB for transcription factors
- SNAI2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 3.56 | n/a | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP diastolic blood pressure (dbp), fasting insulin, homa-b, homa-ir, ldl cholesterol, mitral annular calcium, parkinsons disease, rheumatoid arthritis, tetrology of fallot, total cholesterol, total cholesterol change with statins, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid