rs2969777 chr2:47654411 G>A
- Sequence
gctcccacatacagctgtgtgacc[G/A]gctctcccctgccttcagggtcag
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) MCF10A (breast epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.28 | 0.39 | 1.31 | n/a | No Hit | |||
| STAG1_HUMAN | 2.16 | -0.11 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2