rs2975781 chr2:240627012 C>T
- Sequence
tgaccttgtcatcagaaggggaag[C/T]ggggcctcagaggcgtgctgctgg
- ASB in cell types
- THP-1 (acute monocytic leukemia) CTV-1 (Adult T acute lymphoblastic leukemia) monocyte-derived dendritic cells monocytes from periferal blood
- ASB for transcription factors
- SPI1_HUMAN ELF1_HUMAN FLI1_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.30 | 2.73 | 1.46 | 3.82 | Concordant | |||
| ELF1_HUMAN | -3.35 | 3.24 | 1.00 | 1.56 | Weak Concordant | |||
| FLI1_HUMAN | n/a | 2.92 | 1.00 | 0.11 | Weak Concordant | |||
| ETS1_HUMAN | -2.31 | 2.73 | 1.00 | 1.65 | Weak Concordant | |||
| STAT1_HUMAN | n/a | 1.62 | 3.00 | n/a | No Hit |
Items per page:
1 – 5 of 5
Motif analysis
