rs2976552 chr8:133357140 G>A

Sequence
tccagatcacgtaggaaggaaata[G/A]caaaccaagactcaaacccgggat
ASB in cell types
D283 Med (medulloblastoma) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
OTX2_HUMAN TCF21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN -2.83 1.97 1.002.8·10-3 1.33 n/a No Hit
TCF21_HUMAN -1.46 2.50 1.000.04 2.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium hip bone mineral density (bmd)

Download