rs2986060 chr10:103515691 C>G

Sequence
tttagctcagccatgaaagtgaaa[C/G]cagatgacgaatgaactagtgtcc
ASB in cell types
Tet21N (neuroblastoma)
ASB for transcription factors
TWST1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TWST1_HUMAN 2.65 n/a 4.7·10-31.00 1.00 -1.89 Weak Concordant
CTCF_HUMAN 0.22 1.03 1.000.05 1.02 n/a No Hit
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Motif analysis

TWST1_HUMAN Weak Concordant
TWST1_HUMAN pic

Genetic associations

GRASP hdl cholesterol microalbuminuria total cholesterol
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia Colon_Transverse Testis

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