rs299299 chr5:163505816 T>G
- Sequence
ccgagggggacgagccaccggggc[T/G]cgggcggctttgcaggcgtattcc
- ASB in cell types
- K562 (myelogenous leukemia) breast tumor
- ASB for transcription factors
- EGR1_HUMAN ANDR_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | n/a | 1.95 | 2.00 | 3.34 | Concordant | |||
| ANDR_HUMAN | 2.20 | -0.97 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.25 | -4.71 | 2.00 | n/a | No Hit |
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Motif analysis
