rs29963 chr5:94361940 T>A
- Sequence
aaacttacacacactgaagaacag[T/A]gtgtgcagaacaggctgcaagaac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- PRGR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRGR_HUMAN | -0.80 | 2.61 | 2.00 | 3.52 | Concordant | |||
| GCR_HUMAN | -0.44 | 2.12 | 2.67 | 7.81 | Concordant |
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Motif analysis
