rs2998077 chr10:32139394 G>A
- Sequence
gagctgccagttaaagtcactcca[G/A]attcccaaggcaacctgttcccct
- ASB in cell types
- MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) CTV-1 (Adult T acute lymphoblastic leukemia) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line)
- ASB for transcription factors
- JUN_HUMAN RFX5_HUMAN CDN1B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.01 | 1.28 | 1.80 | n/a | No Hit | |||
| RFX5_HUMAN | 2.49 | -2.03 | 1.00 | n/a | No Hit | |||
| CDN1B_HUMAN | 0.38 | 1.54 | 2.00 | n/a | n/a |
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