rs300955 chr4:143281968 T>C
- Sequence
taaacacagaaactgaaatcaaaa[T/C]ttcaaaccaaccacaaagtgcagt
- ASB in cell types
- 22RV1 (prostate carcinoma) ZR-75-1 (invasive ductal carcinoma) SYO-1(Biphasic synovial sarcoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN SSXT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.61 | -0.42 | 1.50 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.11 | 1.45 | 1.90 | n/a | No Hit | |||
| SSXT_HUMAN | -1.91 | 2.40 | 1.00 | n/a | n/a |
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