rs301461 chr9:4644835 T>C

Sequence
cctctctcaccagctcaggtctta[T/C]gtcactcaagacacactgcatagc
ASB in cell types
GM12891 (male B- cells lymphoblastoid cell line) stomach
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.07 1.65 1.005.4·10-5 1.17 n/a No Hit
STAG1_HUMAN -0.29 1.58 1.000.03 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hypertension (early onset hypertension) irritible bowel syndrome microalbuminuria urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Visceral_Omentum Pancreas Whole_Blood

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