ADASTRA v5.1.3
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rs301461
chr9:4644835
T
>
C
Sequence
cctctctcaccagctcaggtctta[T/C]gtcactcaagacacactgcatagc
ASB in cell types
GM12891 (male B- cells lymphoblastoid cell line)
stomach
ASB for transcription factors
CTCF_HUMAN
STAG1_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
-0.07
1.65
1.00
5.4·10
-5
1.17
n/a
No Hit
STAG1_HUMAN
-0.29
1.58
1.00
0.03
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
hypertension (early onset hypertension)
,
irritible bowel syndrome
,
microalbuminuria
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Adipose_Visceral_Omentum
,
Pancreas
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)