rs3019278 chr8:94434339 T>C
- Sequence
cattacaactaaggcataacaata[T/C]aaaaagggagaaaaaaagctttag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.52 | 0.64 | 1.10 |
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Motif analysis
No data available
Genetic associations
GRASP ldl cholesterol, ldl cholesterol change with statins, obesity with early age of onset (age >2), parkinsons disease, total cholesterol change with statins, triglycerides
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood