ADASTRA v5.1.3
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rs3028
chr9:87536447
C
>
T
Sequence
acttaaagctcttatctgtctgta[C/T]tgattttgaaagccaagagcctaa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN
MEF2B_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN
2.15
-1.95
0.04
1.00
1.00
n/a
n/a
MEF2B_HUMAN
1.09
-1.09
0.05
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
hypertension (early onset hypertension)
,
infant head circumference
,
obesity with early age of onset (age >2)
,
salmonella-induced pyroptosis
,
schizophrenia
GTEx eQTL
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)