rs3028 chr9:87536447 C>T

Sequence
acttaaagctcttatctgtctgta[C/T]tgattttgaaagccaagagcctaa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN MEF2B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 2.15 -1.95 0.041.00 1.00 n/a n/a
MEF2B_HUMAN 1.09 -1.09 0.051.00 1.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP hypertension (early onset hypertension) infant head circumference obesity with early age of onset (age >2) salmonella-induced pyroptosis schizophrenia
GTEx eQTL Thyroid Whole_Blood

Download