rs306587 chr10:30433979 G>C

Sequence
atgaggggcggcggggtggcgggt[G/C]ggggggagacgcggaatttcccag
ASB in cell types
renal cortex GM12878 (female B-cells lymphoblastoid cell line) germinal center CD77+ B cells
ASB for transcription factors
CREB1_HUMAN FOXP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN -1.72 1.99 1.002.0·10-3 1.00 n/a No Hit
FOXP1_HUMAN 2.42 2.01 0.031.00 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Nerve_Tibial Skin_Sun_Exposed_Lower_leg

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