ADASTRA v5.1.3
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Bill Cipher
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs306789
chr9:121358991
A
>
C
Sequence
tgttgtgttcctattttctgtatc[A/C]agtgtcatcctcatttttagtttg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN
IKZF2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN
2.76
-2.50
2.7·10
-3
1.00
1.00
n/a
No Hit
IKZF2_HUMAN
2.11
-1.61
0.04
1.00
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
mitral annular calcium
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Artery_Aorta
,
Artery_Coronary
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Spinal_cord_cervical_c-1
,
Breast_Mammary_Tissue
,
Colon_Sigmoid
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
,
Pituitary
,
Prostate
,
Skin_Sun_Exposed_Lower_leg
,
Small_Intestine_Terminal_Ileum
,
Spleen
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)