ADASTRA v5.1.3
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rs307739
chr8:141182470
G
>
A
Sequence
tccacagaccaagatactttgacc[G/A]tggcatttgaatacatggtatttt
ASB in cell types
germinal center B-cells
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
MEF2B_HUMAN
COT1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN
1.28
3.32
1.00
0.02
1.47
n/a
No Hit
COT1_HUMAN
2.33
-2.17
0.03
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
autism
,
hip bone mineral density (bmd)
,
spine bone mineral density (bmd)
GTEx eQTL
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Nerve_Tibial
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)