rs308051 chr19:3104158 G>C
- Sequence
tcggatgagcccccagctcctgct[G/C]tcagggctgcgccctcttgtggcg
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines) THP-1 (acute monocytic leukemia) H929 (plasma cell myeloma) CD14+ monocytes
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN STAT1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.16 | 2.21 | 1.07 | n/a | n/a | |||
| CTCF_HUMAN | 0.94 | 1.22 | 1.18 | -3.62 | Discordant | |||
| STAT1_HUMAN | n/a | 3.00 | 2.00 | n/a | No Hit | |||
| RAD21_HUMAN | 1.40 | 0.56 | 1.16 | n/a | n/a |
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Motif analysis
