rs309914 chr5:43007507 T>C

Sequence
actgctcaggagaagctgcaggct[T/C]gacccaccagaggtgctgccaccg
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia) 22RV1 (prostate carcinoma)
ASB for transcription factors
SPT5H_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPT5H_HUMAN -0.74 1.55 1.000.02 1.33 n/a n/a
ANDR_HUMAN -1.12 2.19 1.000.03 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP triglycerides triglycerides change with statins
GTEx eQTL Artery_Aorta Artery_Tibial Brain_Caudate_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Mucosa Lung Muscle_Skeletal Nerve_Tibial Spleen Testis Whole_Blood

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