rs3111493 chr5:172113183 G>A
- Sequence
tctattaagtaaaacccagtaggg[G/A]ccaggatgtggtgaaaagagaatt
- ASB in cell types
- MOLM14 (Adult acute myeloid leukemia) SU-DHL-1 (Anaplastic large cell lymphoma)
- ASB for transcription factors
- BRD4_HUMAN CDK8_HUMAN CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 1.82 | -1.20 | 1.00 | n/a | n/a | |||
| CDK8_HUMAN | 1.76 | -0.74 | 1.00 | n/a | n/a | |||
| CEBPB_HUMAN | 2.44 | n/a | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Esophagus_Muscularis