rs3116597 chr13:50512228 G>C

Sequence
agaatttggaaaaaaaaaaaaaaa[G/C]cttgctactaggtcacttagaaga
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia) MS-1 (Small cell lung carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MOLT-4 (Adult T acute lymphoblastic leukemia) 0.19 1.33 1.000.04 1.00
MS-1 (Small cell lung carcinoma) -1.24 1.65 1.000.04 1.00
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose bipolar disorder bipolar disorder and major depressive disorder body mass index (bmi) height major depressive disorder serum creatinine triglycerides waist hip ratio
GTEx eQTL Breast_Mammary_Tissue

Download