rs312017 chr11:68297805 T>C

Sequence
ccctggccacgtccatcttccacg[T/C]cctcccacgcagccccctccgccc
ASB in cell types
T47D (invasive ductal carcinoma) spleen neural cell A549 (lung carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.03 0.52 2.9·10-81.00 1.44 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adrenal_Gland Artery_Aorta Artery_Tibial Brain_Amygdala Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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