ADASTRA v5.1.3
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rs313177
chr6:85323579
G
>
A
Sequence
catttcagatgtctctatcttcag[G/A]tgagccccaaatgattcttacaaa
ASB in cell types
HEK293 (embryonic kidney)
THP-1 (acute monocytic leukemia)
CD34+ hematopoietic stem cells
esophagus squamous epithelium
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(+2 others)
ASB for transcription factors
STAG1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN
0.62
-0.23
0.02
1.00
1.00
n/a
n/a
Items per page:
5
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Motif analysis
No data available
Genetic associations
No data available
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)