rs3138491 chr9:89604123 C>T
- Sequence
gtactgggggcgtgcactcaggga[C/T]cacggagtggcactcagcctcgac
- ASB in cell types
- esophagus muscularis mucosa
- ASB for transcription factors
- CTCF_HUMAN BRD4_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.98 | 0.53 | 1.13 | -2.47 | Concordant | |||
| BRD4_HUMAN | 1.66 | -0.28 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | -0.36 | 1.59 | 1.00 | n/a | n/a |
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Motif analysis
