rs318449 chr6:2932221 A>G

Sequence
tgcgactgcagaaatggctgttgc[A/G]tggagaaaacatgagaatgaggct
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.12 0.68 1.004.4·10-3 1.27
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. alzheimers disease without psychotic symptoms) alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. controls) hdl cholesterol hdl cholesterol change with statins premature ovarian failure spine bone mineral density (bmd) triglycerides
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Cells_EBV-transformed_lymphocytes Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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