ADASTRA v5.1.3
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rs319167
chr5:146913481
T
>
C
Sequence
ttgaaagaaatagaggccaacata[T/C]agttccagtaatgactgaaattct
ASB in cell types
LNCaP C4-2B (prostate carcinoma)
LNCaP (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
2.01
-1.43
3.8·10
-4
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol change with statins
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Heart_Atrial_Appendage
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)