rs319766 chr17:33235262 A>G
- Sequence
accttctccctcccccttcccagg[A/G]tcaggtagtccattttaacagggg
- ASB in cell types
- BEAS-2B (bronchial epithelium) TTC-1240 (Rhabdoid tumor of the kidney)
- ASB for transcription factors
- ESR1_HUMAN SSXT_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.18 | 1.97 | 1.83 | 2.56 | Concordant | |||
| SSXT_HUMAN | -1.58 | 1.94 | 1.00 | n/a | n/a | |||
| GCR_HUMAN | -0.03 | 1.29 | 1.50 | n/a | No Hit |
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Motif analysis
