rs322135 chr19:11269041 A>G

Sequence
ggagagcacaaaaccaagggagac[A/G]ctgacgtgttggattgttttttct
ASB in cell types
BEAS-2B (bronchial epithelium) 22RV1 (prostate carcinoma)
ASB for transcription factors
GCR_HUMAN ANDR_HUMAN FLI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 0.82 1.94 1.002.4·10-4 1.00 n/a No Hit
ANDR_HUMAN 2.95 -3.67 1.1·10-31.00 2.00 n/a No Hit
FLI1_HUMAN 2.54 -1.75 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol rheumatoid arthritis total cholesterol
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Mucosa Heart_Left_Ventricle Lung Prostate Skin_Not_Sun_Exposed_Suprapubic Spleen Thyroid Whole_Blood

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