rs325700 chr11:6234584 C>T

Sequence
gccgaacctggccgggcccggttg[C/T]tgctgcggtgttaggtgagttcag
ASB in cell types
K562 (myelogenous leukemia) breast tumor CD14+ monocytes
ASB for transcription factors
ESR1_HUMAN STAT1_HUMAN VEZF1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 2.90 n/a 4.2·10-31.00 2.00 n/a No Hit
STAT1_HUMAN 2.43 n/a 0.021.00 3.00 n/a No Hit
VEZF1_HUMAN -0.93 2.02 1.000.02 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Stomach,  Testis,  Thyroid,  Whole_Blood

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