ADASTRA v5.1.3
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rs327087
chr4:186723970
C
>
T
Sequence
ggctgccggctctgggaccgcggg[C/T]tcggccacgcagtcccgcccggac
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
RARA_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
2.71
-3.84
2.9·10
-3
1.00
2.00
n/a
No Hit
RARA_HUMAN
-0.82
1.41
1.00
0.04
1.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Aorta
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)