rs327293 chr5:38649180 G>A

Sequence
catgctgagcttggaattgaaagg[G/A]atggtatcttccatttatccactt
ASB in cell types
CFPAC-1(pancreatic ductal adenocarcinoma)
ASB for transcription factors
FOXA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN -0.12 1.08 1.009.2·10-3 1.50 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) college completion fasting blood glucose parkinsons disease refractive error
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Testis Thyroid

Download