rs327992 chr9:105297021 C>T

Sequence
agagaaccagtccttcatctctta[C/T]gccacaatgctacattcctctggg
ASB in cell types
SUM159PT (Triple negative breast cancer)
ASB for transcription factors
CEBPB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 1.44 -0.85 4.0·10-31.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol homa-b obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Brain_Nucleus_accumbens_basal_ganglia Heart_Atrial_Appendage Lung Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis

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