rs32880 chr5:82969166 G>A

Sequence
gaagaaaagtcagcatggagacaa[G/A]tgatctcacaacaaggccatcttt
ASB for transcription factors
RFX5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFX5_HUMAN 2.65 n/a 8.0·10-31.00 3.00 -0.55 Weak Concordant
Items per page:
1 – 1 of 1

Motif analysis

RFX5_HUMAN Weak Concordant
RFX5_HUMAN pic

Genetic associations

GRASP biploar disorder (bipolar schizoaffective disorder) bipolar disorder, combined control dataset hdl cholesterol
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Brain_Cortex Lung Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Vagina

Download