ADASTRA v5.1.3
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rs32880
chr5:82969166
G
>
A
Sequence
gaagaaaagtcagcatggagacaa[G/A]tgatctcacaacaaggccatcttt
ASB for transcription factors
RFX5_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFX5_HUMAN
2.65
n/a
8.0·10
-3
1.00
3.00
-0.55
Weak Concordant
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Motif analysis
RFX5_HUMAN
Weak Concordant
Show reverse complement
Show rev. comp.
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Genetic associations
GRASP
biploar disorder (bipolar schizoaffective disorder)
,
bipolar disorder, combined control dataset
,
hdl cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Brain_Cortex
,
Lung
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Vagina
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
Go to motif analysis