rs329118 chr5:134525973 C>T

Sequence
gccggtccctgcagcggcgcgtag[C/T]cgagggcagcgcccgtcagggggg
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines) HCT-116 (colon carcinoma)
ASB for transcription factors
MBD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MBD4_HUMAN 1.40 -0.28 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI age of smoking initiation (mtag) cigarettes smoked per day (mtag)
GTEx eQTL Cells_Cultured_fibroblasts

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