ADASTRA v5.1.3
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rs329118
chr5:134525973
C
>
T
Sequence
gccggtccctgcagcggcgcgtag[C/T]cgagggcagcgcccgtcagggggg
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines)
HCT-116 (colon carcinoma)
ASB for transcription factors
MBD4_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MBD4_HUMAN
1.40
-0.28
0.03
1.00
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
EMBL-EBI
age of smoking initiation (mtag)
,
cigarettes smoked per day (mtag)
GTEx eQTL
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)