rs329119 chr5:134526026 C>T
- Sequence
gcggagcaaggtaagatccagccc[C/T]cggcggatgggccctgcgcatctc
- ASB in cell types
- K562 (myelogenous leukemia) primary B-CLL cells HCT-116 (colon carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- HDAC1_HUMAN RFOX2_HUMAN BRD4_HUMAN MBD4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC1_HUMAN | 2.15 | -1.06 | 2.00 | n/a | n/a | |||
| RFOX2_HUMAN | 1.98 | -1.26 | 2.00 | n/a | n/a | |||
| BRD4_HUMAN | 1.86 | 0.73 | 1.50 | n/a | n/a | |||
| MBD4_HUMAN | 1.35 | -0.31 | 1.00 | n/a | n/a |
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